models/johnpye/idadenx.a4c

REQUIRE "ivpsystem.a4l";
REQUIRE "atoms.a4l";

(*
	ASCEND model based on the 'idadenx.c' example problem that accompanies IDA.
	The root-finding part isn't yet implemented though.
    ----------------------------------------------------------------------------
	This simple example problem for IDA, due to Robertson, 
	is from chemical kinetics, and consists of the following three 
	equations:

	     dy1/dt = -.04*y1 + 1.e4*y2*y3
	     dy2/dt = .04*y1 - 1.e4*y2*y3 - 3.e7*y2**2
	        0   = y1 + y2 + y3 - 1

	on the interval from t = 0.0 to t = 4.e10, with initial
	conditions: y1 = 1, y2 = y3 = 0.

	This model is tested (using the same parameters as used by idadenx.c) by the
	script pygtk/test.py.
*)
MODEL idadenx;
	y1, y2, y3 IS_A factor;
	dy1_dt IS_A factor;
	dy2_dt IS_A factor;

	eq1: dy1_dt = -0.04 * y1 + 1e4 * y2*y3;
	eq2: dy2_dt = +0.04 * y1 - 1e4 * y2*y3 - 3e7*y2^2;
	eq3: 0 = y1 + y2 + y3 - 1;
	
	t IS_A time;
METHODS

METHOD values; (* initial values *)
	y1 := 1;
	y2 := 0;
	y3 := 0;
	t := 0 {s};
END values;

METHOD specify;
	FIX y1, y2;
END specify;

METHOD ode_init;
	FREE y1, y2;
	t.ode_type := -1; t := 0 {s};

	dy1_dt.ode_id := 1; dy1_dt.ode_type := 2;
	y1.ode_id := 1; y1.ode_type := 1;

	dy2_dt.ode_id := 2; dy2_dt.ode_type := 2;
	y2.ode_id := 2; y2.ode_type := 1;

	(* y3.ode_id := 3; *)

	t.obs_id := 1;
	y1.obs_id := 2;
	y2.obs_id := 3;
	y3.obs_id := 4;
	dy1_dt.obs_id := 5;
	dy2_dt.obs_id := 6;

	y1.ode_atol := 1e-8;
	y2.ode_atol := 1e-14;
	y3.ode_atol := 1e-6;
END ode_init;
	
METHOD on_load;
	RUN reset; 
	RUN values;
	RUN ode_init;
END on_load;

END idadenx;
1	REQUIRE "ivpsystem.a4l";
2	REQUIRE "atoms.a4l";
3
4	(*
5	ASCEND model based on the 'idadenx.c' example problem that accompanies IDA.
6	The root-finding part isn't yet implemented though.
7	----------------------------------------------------------------------------
8	This simple example problem for IDA, due to Robertson,
9	is from chemical kinetics, and consists of the following three
10	equations:
11
12	dy1/dt = -.04y1 + 1.e4y2*y3
13	dy2/dt = .04y1 - 1.e4y2y3 - 3.e7y2**2
14	0 = y1 + y2 + y3 - 1
15
16	on the interval from t = 0.0 to t = 4.e10, with initial
17	conditions: y1 = 1, y2 = y3 = 0.
18
19	This model is tested (using the same parameters as used by idadenx.c) by the
20	script pygtk/test.py.
21	*)
22	MODEL idadenx;
23	y1, y2, y3 IS_A factor;
24	dy1_dt IS_A factor;
25	dy2_dt IS_A factor;
26
27	eq1: dy1_dt = -0.04 * y1 + 1e4 * y2*y3;
28	eq2: dy2_dt = +0.04 * y1 - 1e4 * y2y3 - 3e7y2^2;
29	eq3: 0 = y1 + y2 + y3 - 1;
30
31	t IS_A time;
32	METHODS
33
34	METHOD values; (* initial values *)
35	y1 := 1;
36	y2 := 0;
37	y3 := 0;
38	t := 0 {s};
39	END values;
40
41	METHOD specify;
42	FIX y1, y2;
43	END specify;
44
45	METHOD ode_init;
46	FREE y1, y2;
47	t.ode_type := -1; t := 0 {s};
48
49	dy1_dt.ode_id := 1; dy1_dt.ode_type := 2;
50	y1.ode_id := 1; y1.ode_type := 1;
51
52	dy2_dt.ode_id := 2; dy2_dt.ode_type := 2;
53	y2.ode_id := 2; y2.ode_type := 1;
54
55	(* y3.ode_id := 3; *)
56
57	t.obs_id := 1;
58	y1.obs_id := 2;
59	y2.obs_id := 3;
60	y3.obs_id := 4;
61	dy1_dt.obs_id := 5;
62	dy2_dt.obs_id := 6;
63
64	y1.ode_atol := 1e-8;
65	y2.ode_atol := 1e-14;
66	y3.ode_atol := 1e-6;
67	END ode_init;
68
69	METHOD on_load;
70	RUN reset;
71	RUN values;
72	RUN ode_init;
73	END on_load;
74
75	END idadenx;